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EMDB has officially been elevated to a Core Data Resource by ELIXIR
January 6, 2024
We are delighted to share that EMDB has officially been elevated to a Core Data Resource by ELIXIR, recognising it as a European data resource of fundamental importance to the wider life-science community and the long-term preservation of biological data.
EMDB Nucleic Acids Research paper
November 23, 2023
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EMDB Now Provides Metadata in mmCIF Format
October 4, 2023
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Kyle Morris Appointed New EMDB Team Leader
October 2, 2023
Kyle Morris has joined the EMDB as our new team leader! Kyle brings 10 years of first-hand experience in cryoEM to our team, from his own research, as well as work in imaging and structural biology facilities.
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December 21, 2022
EMDB proudly announces the EMICSS resource. It provides weekly updated cross-reference information for all EMDB entries to other resources (including PDB, EMPIAR, Europe PMC, UniProt, AlphaFold DB and many more.) Read more here: emdb-empiar.org/emicss.
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October 12, 2022
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February 2, 2022
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July 1, 2021
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Recent Entries
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Cluster of bipartite complex of MmpL5-AcpM from Mycolicibacterium smegmatis
Polyclonal immune complex of Fab from Cynomolgus Macaque R996 at week 12 binding H1 HA
Polyclonal immune complex of Fab from Cynomolgus Macaque 6974 at week 12 binding H1 HA
Polyclonal immune complex of human subject 321-2006 Fab binding H1 HA
Polyclonal immune complex of human subject 321-2012 Fab binding H1 HA
BG505 MD39.3 Env gp151 MPER nanodisc in complex with 10E8, BG18 and VRC01 Fabs (1x 10E8 Fab)
BG505 MD39.3 Env gp151 MPER nanodisc in complex with 10E8, BG18 and VRC01 Fabs (2x 10E8 Fabs)
BG505 MD39.3 SOSIP.664 in complex with 3BC315, BG18 and VRC01 Fabs
Human EAAT3 with compound 3e and digitonin.glyco-diosgenin bound at inward facing state
Human EAAT3 with compound 3e and cholesterol bound at inward facing state
E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon
Cryo-EM Structure of DHX36 bound to a RNA G-quadruplex derived from the cMyc G-quadruplex, Class 2
Cryo-EM Structure of DHX36 bound to a RNA G-quadruplex derived from the cMyc G-quadruplex, Class 1
E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon
Codon sampling state obtained from Anisomycin-treated mammalian ribosomes
Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes
Mammalian ribosomes bound to Anisomycin in the rotated conformation
Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA
Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
cryo-EM structure of the Nipah virus polymerase containing the connecting domain
Polyclonal immune complex of Fab from Rhesus Macaque BB798E at week 12 binding H1 HA
Structure of 16.ND.92 Fab in complex with A/Solomon Islands/3/2006(H1N1) influenza virus Hemagglutinin
Polyclonal immune complex of human subject 321-2009 Fab binding H1 HA
CryoEM structure of inducible Lysine decarboxylase from Hafnia alvei D-hydrazino-Lysine analog at 2.3 Angstrom resolution
Polyclonal immune complex of Fab from Cynomolgus Macaque T009 at week 12 binding H1 HA
Cryo-EM structure of CpAgo_gDNA-tg_ssDNA monomeric ternary complex
Structure of FtsZ1 in complex with GMPCPP from Candidatus Odinarchaeota
Cryo-EM structure of a truncated Nipah virus (Malaysia Strain) L:P complex
Light Harvesting complex 3 (LH3), B800-B820, of Rhodoblastus (Rbl.) acidophilus strain 7750
Light Harvesting complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) acidophilus strain 7750
Structure of alpha2a adrenergic receptor in complex with Go heterotrimer, scFv16, and N-(5-methylnaphthalen-1-yl)pyridin-4-amine (compound 4905)
Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant
Influenza A(H5N1) Clade 2.3.4.4b in complex with head specific monoclonal antibody NVX.361.4
Cryo-EM structure of the zeaxanthin-bound light-driven proton pumping rhodopsin, NM-R1
Cryo-EM structure of the myxol-bound light-driven chloride ion-pumping rhodopsin, NM-R3
Cryo-EM structure of the myxol-bound light-driven proton pumping rhodopsin, NM-R1
Cryo-EM structure of the light-driven chloride ion-pumping rhodopsin, NM-R3
Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFAM/TFB2M/DNA/RNA) with a slipped 3-mer RNA, pppGpGpA (slipped IC3)
Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFB2M/DNA/RNA) without TFAM; and with a 2-mer RNA (pppGpA) and GTP poised for catalysis (pre-IC3-TFAM)
Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFB2M/DNA/RNA) without TFAM; and with a slipped 3-mer RNA, pppGpGpA (slipped IC3-TFAM)
Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFAM/TFB2M/DNA/RNA) with a 2-mer RNA (pppGpA) and GTP poised for catalysis (pre-IC3)
Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFAM/TFB2M/DNA/RNA) with a slipped 3-mer RNA (pppGpGpA) and GTP poised for catalysis (slipped pre-IC4)
Structure of in-vivo formed alpha-synuclein fibrils purified from a M83+/- mouse brain injected with recombinant 1B fibrils
Cryo-EM structure of 3nv.2, a modified 426c SOSIP-based immunogen
CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Pre-fusion HERV-K Envelope Protein Trimer Ectodomain in complex with Kenv-6 Fab
Focused map of Pfs230 domains 1-8 of the endogenous Pfs230-Pfs48/45 complex
Focused map of Pfs230 (domains 9-14) and Pfs48/45 of the endogenous Pfs230-Pfs48/45 complex
CryoEM structure of the Azotobacter vinelandii glutamine synthetase
Cryo-EM structure of SARS-CoV-2 XBB spike protein in complex with three-nAb 8H12, 3E2 and 1C4
Cryo-EM structure of CpAgo_gDNA-tg_bubble_dsDNA dimeric ternary complex
Cryo-EM structure of CpAgo_gDNA-tg_bubble_dsDNA monomeric ternary complex
Cryo-EM structure of CpAgo_gDNA-tg_dsDNA monomeric ternary complex
Cryo-EM structure of Ufd2/Ubc4-Ub in complex with K29-linked diUb (monomeric conformation)
cryo-EM structure of Ufd2/Ubc4-Ub in complex with K29-linked diUb (dimeric conformation)
cryo-EM structure of Ufd2/Ubc4-Ub in complex with K29-linked triUb (dimeric conformation)
cryo-EM structure of Ufd2/Ubc4-Ub in complex with K29-linked triUb (monomeric conformation)
CryoEM structure of human rho1 GABAA receptor in complex with GABA and neurosteroid pregnanolone
CryoEM structure of human rho1 GABAA receptor in complex with neurosteroid pregnanolone
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S28P, polymorph 1
CryoEM structure of human rho1 GABAA receptor in complex with neurosteroid THDOC
CryoEM structure of human rho1 GABAA receptor in complex with GABA and neurosteroid THDOC
CryoEM structure of the proton-dependent antibacterial peptide transporter SbmA in complex with FabS11-1 in lipid nanodiscs at pH 5.5, inward-open state
Beta carbonic anhydrase CsoSCA from the Halothiobacillus neapolitanus alpha-carboxysome
CryoEM structure of the proton-dependent antibacterial peptide transporter SbmA in complex with FabS11-1 in lipid nanodiscs at pH 5.5, inward-closed state
CryoEM structure of human rho1 GABAA receptor in complex with loreclezole
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S28P, polymorph 2
CryoEM structure of human rho1 GABAA receptor in complex with GABA and loreclezole
Salmonella typhimurium polynucleotide phosphorylase in complex with recognition site of RNase E
Extracellular domain of the Fap2 autotransporter adhesin from Fusobacterium nucleatum ATCC23726
CryoEM structure of human rho1 GABAA receptor in complex with muscimol and neurosteroid THDOC in the primed state
CryoEM structure of human rho1 GABAA receptor in complex with muscimol in the primed state
CryoEM structure of human rho1 GABAA receptor in complex with muscimol in the intermediate state
CryoEM structure of human rho1 GABAA receptor in complex with muscimol and neurosteroid THDOC in the desensitized state
Toxoplasma gondii cytochrome bc1 complex from the respiratory supercomplex III2-IV inhibited by atovaquone and ELQ-300
Cryo-EM structure of domperidone-bound human SLC19A3 in inward-open state
Membrane-distal part of extracellular domain of the Fap2 autotransporter adhesin from Fusobacterium nucleatum ATCC23726
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3(R439G,R163I)- TARP gamma2 in the apo state.
Structure of the Ypt7 GEF complex Mon1-Ccz1 from Chaetomium Thermophilum
Closed state MmCpn under ATP/AlFx condition by subtomogram averaging
Tripartite complex of MmpL5-S5-AcpM from Mycolicibacterium smegmatis
CryoEM map of 4F11 and MxR Fabs bound to HMPV DS-CavEs2 preF monomer
CryoEM structure of 4F11 Fab bound to stabilized MPV-2c HMPV preF