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EMDB has officially been elevated to a Core Data Resource by ELIXIR
January 6, 2024
We are delighted to share that EMDB has officially been elevated to a Core Data Resource by ELIXIR, recognising it as a European data resource of fundamental importance to the wider life-science community and the long-term preservation of biological data.
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Structure of thioferritin with averaged iron mineral core, from Pyrococcus furiosis
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 7
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 5
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 6
Min22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a H3:SNAP-25 SN1), non-hydrolyzing, class 27
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 12
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 11
The right arm focus refinement map of human Low-density lipoprotein receptor-related protein 2
The left arm focus refinement map of human Low-density lipoprotein receptor-related protein 2
The consensus map of human Low-density lipoprotein receptor-related protein 2
The base portion focus refinement map of human Low-density lipoprotein receptor-related protein 2
The complex I focus refinement map of supercomplex 1+III2 open state
The complex I focus refinement map of respiratory supercomplex I+III2+IV open state
The complex IV focus refinement map of respiratory supercomplex I+III2+IV open state
The memnbrane arm part II focus refinement map of human kidney respiratory complex I
The peripheral arm focus refinement map of human kidney respiratory complex I
Cryo-EM structure of human Low-density lipoprotein receptor-related protein 2
The membrane arm part I focus refinement map of human kidney respiratory complex I
Structure of thioferritin exhibiting iron mineral nucleation, from Pyrococcus furiosis
Complex of the phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with (R)-BPO-27 and ATP/Mg
Recombinant A(H5N1) A/American Wigeon/South Carolina/22/000345-001/2021 (A/AW/SC/2021) clade 2.3.4.4b nanoparticle in complex with mouse monoclonal antibody NVX.73.2
CryoEM structure of Siamese algae-eater influenza-like virus (SAEILV) NA
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 16
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 3
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 4
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), 3:2:1 alphaSNAP-syntaxin-1a-SNAP-25 subcomplex local refinement, non-hydrolyzing, class 13
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 18
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 17
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 19
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), 4:2:2 alphaSNAP-syntaxin-1a-SNAP-25 subcomplex local refinement, hydrolyzing, class 23
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 8
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 10
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 21
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 15
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 20
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 14
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 9
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 29
22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a:SNAP-25), hydrolyzing, class 22
Min22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a H3:SNAP-25 SN1), 4:2:2 alphaSNAP-syntaxin-1a H3-SNAP-25 SN1 subcomplex local refinement, non-hydrolyzing, class 28
CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B. Low resolution consensus.
CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B. Local refinement 2 of 6.
CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B. Local refinement 1 of 6.
CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B. Local refinement 4 of 6.
CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B. Local refinement 6 of 6.
CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B. Local refinement 5 of 6.
CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B. Local refinement 3 of 6.
VLP structure of Chikungunya virus complexed with C34 Fab, 5f block.
VLP structure of Chikungunya virus complexed with C37 Fab, 5f block
VLP structure of Chikungunya virus complexed with C37 Fab, 2f block.
VLP structure of Chikungunya virus complexed with C37 Fab, 3f block
VLP structure of Chikungunya virus complexed with C34 Fab, 3f block
Pseudomonas phage Pa223 full-virion, asymmetric reconstruction, 4 A resolution
Cryo-EM Structure of Fructose Dehydrogenase Variant from Gluconobacter japonicus Truncating Heme 1c and C-Terminal Hydrophobic Regions
Ternary complex of CRBN-DDB1-PDE6D with FPFT-2216 local refinement
Full-length human dynein-1 in phi comformation under Lis1 condition
Dimeric motor domains from phi-like dynein-1 bound to a Lis1 dimer under Nde1-Lis1 condition
Dimeric motor domains from phi-like dynein-1 bound to a Lis1 dimer under Lis1 condition
Full-length human dynein-1 in phi-like comformation bound to a Lis1 dimer under Lis1 condition
Full-length human dynein-1 in phi-like comformation bound to a Lis1 dimer under Nde1-Lis1 condition
C32 reconstruction for the PorKN (single) ring complex of Type IX Secretion System (T9SS)
C32 reconstruction for the PorKN (double) ring complex of Type IX Secretion System (T9SS)
C34 reconstruction for the PorKN (single) ring complex of Type IX Secretion System (T9SS)
Cryo-EM structure of the T9SS PORkN ring complex of P. Gingivalis
C33 reconstruction for the PorKN (single) ring complex of Type IX Secretion System (T9SS)
C34 reconstruction for the PorKN (double) ring complex of Type IX Secretion System (T9SS)
C33 reconstruction for the PorKN (double) ring complex of Type IX Secretion System (T9SS)
Bacteroides thetaiotaomicron siderophore transporter XusA in complex with surface-exposed lipoprotein XusB
cryo-EM structure of TRIP12 in complex with K29/48 branched-triUb
Cryo-EM structure of 5E10 Fab in complex with H3 influenza Singapore 2016 HA trimer
Structure of the human mitochondrial promoter-initiated transcription elongation complex, P-EC13
Structure of the human mitochondrial initially transcribing complex, IC3
Structure of the human mitochondrial transcription initiation transitional complex, TC8
Structure of the human mitochondrial late-stage transcription initiation complex, IC8
Structure of the human mitochondrial late-stage transcription initiation complex, IC8
Structure of the human mitochondrial open transcription initiation complex, IC0
Structure of the human mitochondrial promoter-initiated transcription elongation complex with TEFM, pEC9-TEFM
32-nm repeating structure of central pair complex from mouse sperm
32-nm repeating structure of central pair complex from Kif9 knockout mouse sperm
Cryo-EM structure of mouse PMCA captured in E1-ATP in the presence of Calcium
Cryo-EM structure of mouse PMCA-NPTN complex captured in E2 state (BEF3)
Cryo-EM structure of mouse PMCA-NPTN complex captured in E1 state without calcium
Cryo-EM structure of mouse PMCA-NPTN complex captured in E2-Pi state (ALF4)
Cryo-EM structure of Mouse PMCA-NPTN complex captured in E1-Ca state
Cryo-EM map of the complete PMCA-NPTN complex captured in E1-Ca state
Cryo-EM structure of the heterotrimeric kinesin-2 from Caenorhabditis elegans
Cryo-EM structure of PMCA-NPTN complex captured in E1-Ca-ATP state
96-nm repeating structure of the axonemal doublets form mouse sperm
96-nm repeating structure of the axonemal doublets form Kif9 knockout mouse sperm
Cryo-EM structure of the unliganded human melanocortin receptor 1 (MC1R)-Gs complex
Nucleosome core particle bound by two molecules of DTT-reduced native monomeric myeloperoxidase
Native dimeric Myeloperoxidase bound to nucleosome core particle; consensus map
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, consensus map
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; consensus map
Native dimeric Myeloperoxidase bound to nucleosome core particle; nucleosome focused map
Native dimeric Myeloperoxidase bound to nucleosome core particle; MPO focused map
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; map focused on nucleosome/MPO monomer
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase
Native dimeric Myeloperoxidase bound to nucleosome core particle; composite map
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; map focused on MPO dimer
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, map focused on MPO
Native monomeric Myeloperoxidase bound to nucleosome core particle, late time point
Nucleosome core particle bound by one molecule of DTT-reduced native monomeric myeloperoxidase
Native monomeric Myeloperoxidase bound to nucleosome core particle
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, nucleosome focused map
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state; composite map
Local refinement of 1C5H TCR bound to R-phycoerythrin (gamma chain dimer)
Mouse mitoribosome large subunit assembly intermediate bound to NSUN4, METRF4, GTPBP7, GTPBP10 and the MALSU1-L0R8F8-mt-ACP complex (without uL16m), State B1 (SAMC knock-out)
Structure of the Salmonella flagellar FliPQR complex reconstituted in the peptidisc
Cryo-EM structure of the aspartate:alanine antiporter AspT mutant L60C
Human glucose 6 phosphate catalytic subunit 1 (hG6PC1) bound with phosphate.
Cryo-EM structure of SARS-CoV-2 BA.5 spike protein in complex with three-nAb 8H12, 3E2 and 1C4 (state 2)
Human glucose 6 phosphate catalytic subunit 1 (hG6PC1) bound with G6P
Human glucose 6 phosphate catalytic subunit 1 (hG6PC1) in apo state.
Human glucose 6 phosphate catalytic subunit 1 (hG6PC1) bound with F6P.
Cryo-EM structure of SARS-CoV-2 BA.2.75 spike protein in complex with three-nAb 8H12, 3E2 and 1C4
positive allosteric modulator(MPAM-15)-bound mu-opioid receptor-Gi complex
Cryo-EM structure of SARS-CoV-2 BA.5 spike protein in complex with three-nAb 8H12, 3E2 and 1C4 (state 1)
Cryo-EM structure of SARS-CoV-2 BA.2 spike protein in complex with three-nAb 8H12, 3E2 and 1C4
positive allosteric modulator(BMS986122)-bound mu-opioid receptor-Gi complex
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the open conformation
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the 2-RBD-up conformation, bound to 9-O-Ac-Sia
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the 1-RBD-up conformation
Local refinement of the N-terminal domain (NTD) and receptor binding domain (RBD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation bound to 9-O-Ac-Sia
Class 2 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the 1-RBD-up conformation, bound to 9-O-Ac-Sia
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the 2-RBD-up conformation
Local refinement of the N-terminal domain (NTD) and receptor binding domain (RBD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the open conformation, bound to 9-O-Ac-Sia
Local refinement of the N-terminal domain (NTD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the open conformation bound to 9-O-Ac-Sia
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation, apo state
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the closed conformation bound to 9-O-Ac-Sia.
Electronic microscopy structure of human schlafen14-E211A dimer in complex with dsRNA
CryoEM structure of Molybdenum bispyranopterin guanine dinucleotide formate dehydrogenases ForCE1 from Bacillus subtilis
Perkinsus marinus Respiratory supercomplex CII2CIII2CIV2 consensus map at b state
HER2/ErbB2 extracellular domain (ECD) in compact conformation in complex with trastuzumab (TZB) antibody
Class 3 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Class 1 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
HER2/ErbB2 extracellular domain (ECD) in extended conformation in complex with trastuzumab (TZB) antibody
Cryo-EM structure of the unliganded human melanocortin receptor 4 (MC4R)-Gs complex
Cryo-EM structure of the unliganded human melanocortin receptor 2 (MC2R)-Gs complex
Cryo-EM structure of the unliganded human melanocortin receptor 3 (MC3R)-Gs complex
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, middle state
Cryo-EM structure of the unliganded human melanocortin receptor 5 (MC5R)-Gs complex
Cryo-EM map for complex I focus refinement of respiratory supercomplex I III
Cryo-EM map for complex III focus refinement of respiratory supercomplex I III
The complex IV focus refinement of respiratory supercomplex I III IV
The complex III focus refinement of respiratory supercomplex I III IV
Cryo-EM structure of Candidatus Saccharibacterium phosphoketolase complexed with 2-acetyl-thiamine diphosphate
The complex I focus refinement of respiratory supercomplex I III IV
Cryo-EM structure of Candidatus Saccharibacterium phosphoketolase complexed with thiamine diphosphate
Pseudomonas phage Pa223 periplasmic tunnel (pre-ejection, dodecameric assembly)
Complex III focus refinement map of supercomplex I+III2 open state
The complex III focus refinement map of respiratory supercomplex I+III2+IV open state