Electron Microscopy Data Bank

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Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [137]
Macaca mulatta [39]
Rattus norvegicus [34]
Mus musculus [24]
Trichomonas vaginalis [24]
Human herpesvirus 1 [21]
Mycobacterium phage bxb1 [21]
Plasmodium falciparum [20]
Oryctolagus cuniculus [19]
Cypovirus 1 [17]
Sus scrofa [16]
Synthetic construct [13]
Saccharomyces cerevisiae [12]
Human cytomegalovirus [10]
Escherichia coli [10]
Methanococcus maripaludis [9]
Enterobacteria phage t4 [8]
Severe acute respiratory syndrome coronavirus [8]
Adeno-associated dependoparvovirus a [7]
Trypanosoma brucei [6]
Vibrio virus nt1 [5]
Helicobacter pylori [5]
Shewanella oneidensis [5]
Cyriopagopus schmidti [5]
Staphylococcus virus 80alpha [5]
Drosophila melanogaster [5]
Canis lupus [5]
Equus caballus [5]
Human herpesvirus 3 [4]
Carnivore protoparvovirus 1 [4]
Human immunodeficiency virus 1 [4]
Staphylococcus aureus [4]
Aquareovirus c [4]
(no species) [4]
Legionella pneumophila [4]
Saccharomyces cerevisiae [4]
Lama glama [4]
Bacillus subtilis [3]
Methanospirillum hungatei [3]
Caulobacter vibrioides [3]
Leishmania tarentolae [3]
Tetrahymena thermophila [3]
Proteus penneri [2]
Human herpesvirus 1 [2]
Indiana vesiculovirus [2]
Thermosynechococcus elongatus [2]
Mycobacterium sp. [2]
Thermosynechococcus elongatus [2]
Enterovirus c [2]
Adeno-associated virus [2]
Solenopsis invicta-associated densovirus [2]
Pseudomonas aeruginosa [2]
Rotavirus a [2]
Alphapapillomavirus 9 [2]
Bluetongue virus [2]
Francisella tularensis [2]
Escherichia coli [2]
Plasmodium falciparum [2]
Protoparvovirus carnivoran1 [2]
Yersinia pestis [2]
Vibrio cholerae [2]
Trichomonas vaginalis virus 2 [2]
Fusobacterium nucleatum [2]
Gallus gallus [2]
(no species) [1]
Escherichia phage lambda [1]
Enterovirus c [1]
Enterovirus c [1]
Enterovirus c [1]
Saccharomyces cerevisiae [1]
Saccharomyces cerevisiae [1]
Aquareovirus c [1]
Mapvirus muddy [1]
Lethocerus indicus [1]
Mouse papillomavirus 1 [1]
Thermoplasma acidophilum [1]
Thermotoga maritima [1]
Mycolicibacterium smegmatis [1]
Francisella tularensis [1]
Human mastadenovirus c [1]
Saccharomyces cerevisiae [1]
Dubowvirus dv80alpha [1]
Geobacter sulfurreducens [1]
Human herpesvirus 8 [1]
Escherichia coli [1]
Flavobacterium johnsoniae [1]
Leishmania donovani [1]
Toxoplasma gondii [1]
Plasmodium falciparum [1]
Aequorea victoria [1]
Pipapillomavirus 2 [1]
Helicobacter pylori [1]
Enterovirus c [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Zhou ZH [117]
Stevens A [49]
Cheng Y [48]
Cottrell CA [47]
Ward AB [47]
Shin M [46]
Crofut EH [43]
Kashyap S [43]
Zhang K [43]
Bowman CA [39]
Burton DR [39]
Carnathan DG [39]
Christley S [39]
Copps J [39]
Gross J [39]
Labranche C [39]
Montefiori D [39]
Moore JP [39]
Morpurgo R [39]
Nogal B [39]
Oyen D [39]
Ozorowski G [39]
Patel R [39]
Rakasz EG [39]
Sanders RW [39]
Sather DN [39]
Sewall LM [39]
Silvestri G [39]
Sok D [39]
Torres JL [39]
Vigdorovich V [39]
Wilson IA [39]
Yuan M [39]
Van Breemen M [39]
Van Gils Mj [39]
Van Schooten J [39]
Van Der Woude P [39]
Conway JF [33]
Tan YZ [33]
Julius D [32]
Jih J [31]
Chiu W [30]
Cui Y [30]
Lyumkis D [30]
Huet A [28]
Mckenna R [28]
Passos DO [28]
Barad BA [26]
Grotjahn DA [26]
Johnson PJ [26]
Muratore KA [25]
Agbandje-mckenna M [24]
Aiyer S [24]
Baldwin PR [24]
Benner SA [24]
Bowman ME [24]
Dordevic-marquardt S [24]
Hoshika S [24]
Hull JA [24]
Louie G [24]
Mehrani A [24]
Mietzsch M [24]
Noel JAP [24]
Oh J [24]
Shan Z [24]
Tan SM [24]
Wang D [24]
Wang SE [24]
Freeman KG [22]
Frost A [22]
Ho CM [22]
Jacobs-sera D [22]
Noble AJ [22]
White SJ [22]
Hatfull GF [21]
Ho MC [21]
Lowary TL [21]
Macale LS [21]
Mondal S [21]
Narsico JT [21]
Ortiz V [21]
Park D [21]
Perez RJ [21]
Podgorski J [21]
Silva BH [21]
Mccullough J [20]
Nguyen HC [20]
Sundquist WI [20]
Talledge N [20]
Alvarez-cabrera AL [19]
Crofut E [19]
Li Y [19]
Liu Y-T [19]
Anton L [18]
Cheng W [18]
Cobb DW [18]
Haile M [18]
Han L [18]
Lee CL [18]
Li E [18]

Author by ORCID

Zhou ZH [76]
Cottrell CA [47]
Shin M [46]
Cheng Y [43]
Gross J [39]
Bowman CA [39]
Silvestri G [39]
Burton DR [39]
Ward AB [39]
Morpurgo R [39]
Nogal B [39]
Yuan M [39]
Sewall LM [39]
Sanders RW [39]
Van Schooten J [39]
Labranche C [39]
Sather DN [39]
Sok D [39]
Ozorowski G [39]
Torres JL [39]
Montefiori D [39]
Van Gils Mj [39]
Vigdorovich V [39]
Copps J [39]
Tan YZ [33]
Grotjahn DA [26]
Chiu W [26]
Zhang K [26]
Aiyer S [24]
Hoshika S [24]
Noel JAP [24]
Mckenna R [24]
Wang D [24]
Oh J [24]
Lyumkis D [24]
Passos DO [24]
Johnson PJ [24]
Shan Z [24]
Cui Y [21]
Frost A [21]
Noble AJ [20]
Mccullough J [19]
Talledge N [19]
Nguyen HC [19]
Zhang Y [17]
Sun J [17]
Laughlin TG [15]
Sundquist WI [15]
Pintilie G [15]
Wenzel D [15]
Iwasa J [15]
Martin-serrano J [15]
Alian A [15]
Ullman KS [15]
Frydman J [14]
Eng ET [13]
Zhao Y [13]
Lander GC [13]
Jih J [12]
Goetschius DJ [12]
Villa E [12]
Bepler T [11]
Das R [11]
Rangan R [11]
Kappel K [11]
Rice WJ [11]
Shan SO [11]
Conway JF [11]
Li S [11]
Lentzsch AM [11]
Su Z [11]
Zheludev IN [11]
Zhang K [11]
Biggin PC [10]
Jeruzalmi D [10]
Liu W [10]
Kindig K [10]
Hartmann SR [10]
Acharya P [10]
Berger B [10]
Gibbs E [10]
Seiferth D [10]
Chakrapani S [10]
Schmid MF [10]
Liu YT [10]
Ding K [9]
Carragher B [9]
Parrish CR [9]
Potter CS [9]
Hafenstein SL [9]
Elbaum M [8]
Sosa H [8]
Wrapp D [8]
Benoit MPMH [8]
Pallesen J [8]
Kwok BH [8]
Wang N [8]
Croxford M [8]
Wang H [8]
Agard D [8]

Journal

NAT COMMUN [117]
CELL [55]
BIORXIV [42]
PLOS PATHOG [42]
TO BE PUBLISHED [39]
ELIFE [37]
SCI ADV [28]
J VIROL [22]
PNAS [22]
NATURE [21]
NAT STRUCT MOL BIOL [17]
NAT METHODS [15]
STRUCTURE [15]
SCI REP [9]
CELL REP [8]
J MOL BIOL [8]
J CELL BIOL [7]
MBIO [7]
CURR BIOL [6]
IUCRJ [6]
NAT CHEM BIOL [6]
NAT NANOTECHNOL [6]
SCIENCE [6]
ACS NANO [5]
COMMUN BIOL [5]
PROTEIN CELL [4]
CELL DISCOV [3]
J BACTERIOL [3]
PNAS NEXUS [3]
J STRUCT BIOL [2]
MOL THER METHODS CLIN DEV [2]
PLOS BIOL [2]
VIRUSES [2]
FRONT MOL BIOSCI [1]
J.MUSCLE RES.CELL.MOTIL. [1]
NAT MED [1]
NAT MICROBIOL [1]
NAT PROTOC [1]
RES COMPUT MOL BIOL [1]

Software

Microscope

Electron Source

Film or detector model

External links

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EMD-70983

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CryoEM structure of hook-filament junction complex from Shewanella oneidensis

Release date: July 16, 2025
Resolution: 6.1 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70984

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CryoEM structure of curved flagellar filament from Shewanella oneidensis

Release date: July 16, 2025
Resolution: 3.2 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70985

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CryoEM structure of FlaA filament from Shewanella oneidensis

Release date: July 16, 2025
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9oxj

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70986

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CryoEM structure of FlaB filament from Shewanella oneidensis

Release date: July 16, 2025
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9oxk

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70987

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CryoEM structure of hook from Shewanella oneidensis

Release date: July 16, 2025
Resolution: 4.18 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70678

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Herpes simplex virus type 1 HSV-1 A-capsid pUL6 portal protein, dodecameric complex

Release date: June 11, 2025
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9op4

Stevens A, Kashyap S, Crofut E, Alvarez-Cabrera AL, Jih J, Liu Y-T, Zhou ZH

J Virol (2025) pp. e0050425-e0050425 [ DOI: doi:10.1128/jvi.00504-25 Pubmed: 40607812 ]

EMD-70725

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Herpes simplex virus type 1 HSV-1 C-Capsid portal turrets

Release date: June 11, 2025
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9opv

Stevens A, Kashyap S, Crofut E, Alvarez-Cabrera AL, Jih J, Liu Y-T, Zhou ZH

J Virol (2025) pp. e0050425-e0050425 [ DOI: doi:10.1128/jvi.00504-25 Pubmed: 40607812 ]

EMD-44915

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Single particle CryoEM structure of the Pf80S ribosome in non-rotated PRE state nrt A-P-E

Release date: May 28, 2025
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9bup
Q-score: 0.547

Anton L, Cheng W, Haile M, Cobb DW, Zuh X, Han L, Li E, Nair A, Lee CL, Ho CM

To Be Published

EMD-44916

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Single particle cryoEM structure of the Pf80S ribosome in the POST state nrt with P- and E-site tRNA

Release date: May 28, 2025
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 9buq
Q-score: 0.558

Anton L, Cheng W, Haile M, Cobb DW, Zhu X, Han L, Li E, Nair A, Lee CL, Ho CM

To Be Published

EMD-44918

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Single particle CryoEM structure of the Pf80S ribosome in the unloaded state nrt with E-site tRNA

Release date: May 28, 2025
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 9bus
Q-score: 0.555

Anton L, Cheng W, Haile M, Cobb DW, Zhu X, Han L, Li E, Nair A, Lee CL, Ho CM

To Be Published

Sort by: Download

Showing 1 - 10 of 532. Page 1 of 54

Display:

Statistics

Download

Select database:

EMDB [532]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [137]
Macaca mulatta [39]
Rattus norvegicus [34]
Mus musculus [24]
Trichomonas vaginalis [24]
Human herpesvirus 1 [21]
Mycobacterium phage bxb1 [21]
Plasmodium falciparum [20]
Oryctolagus cuniculus [19]
Cypovirus 1 [17]
Sus scrofa [16]
Synthetic construct [13]
Saccharomyces cerevisiae [12]
Human cytomegalovirus [10]
Escherichia coli [10]
Methanococcus maripaludis [9]
Enterobacteria phage t4 [8]
Severe acute respiratory syndrome coronavirus [8]
Adeno-associated dependoparvovirus a [7]
Trypanosoma brucei [6]
Vibrio virus nt1 [5]
Helicobacter pylori [5]
Shewanella oneidensis [5]
Cyriopagopus schmidti [5]
Staphylococcus virus 80alpha [5]
Drosophila melanogaster [5]
Canis lupus [5]
Equus caballus [5]
Human herpesvirus 3 [4]
Carnivore protoparvovirus 1 [4]
Human immunodeficiency virus 1 [4]
Staphylococcus aureus [4]
Aquareovirus c [4]
(no species) [4]
Legionella pneumophila [4]
Saccharomyces cerevisiae [4]
Lama glama [4]
Bacillus subtilis [3]
Methanospirillum hungatei [3]
Caulobacter vibrioides [3]
Leishmania tarentolae [3]
Tetrahymena thermophila [3]
Proteus penneri [2]
Human herpesvirus 1 [2]
Indiana vesiculovirus [2]
Thermosynechococcus elongatus [2]
Mycobacterium sp. [2]
Thermosynechococcus elongatus [2]
Enterovirus c [2]
Adeno-associated virus [2]
Solenopsis invicta-associated densovirus [2]
Pseudomonas aeruginosa [2]
Rotavirus a [2]
Alphapapillomavirus 9 [2]
Bluetongue virus [2]
Francisella tularensis [2]
Escherichia coli [2]
Plasmodium falciparum [2]
Protoparvovirus carnivoran1 [2]
Yersinia pestis [2]
Vibrio cholerae [2]
Trichomonas vaginalis virus 2 [2]
Fusobacterium nucleatum [2]
Gallus gallus [2]
(no species) [1]
Escherichia phage lambda [1]
Enterovirus c [1]
Enterovirus c [1]
Enterovirus c [1]
Saccharomyces cerevisiae [1]
Saccharomyces cerevisiae [1]
Aquareovirus c [1]
Mapvirus muddy [1]
Lethocerus indicus [1]
Mouse papillomavirus 1 [1]
Thermoplasma acidophilum [1]
Thermotoga maritima [1]
Mycolicibacterium smegmatis [1]
Francisella tularensis [1]
Human mastadenovirus c [1]
Saccharomyces cerevisiae [1]
Dubowvirus dv80alpha [1]
Geobacter sulfurreducens [1]
Human herpesvirus 8 [1]
Escherichia coli [1]
Flavobacterium johnsoniae [1]
Leishmania donovani [1]
Toxoplasma gondii [1]
Plasmodium falciparum [1]
Aequorea victoria [1]
Pipapillomavirus 2 [1]
Helicobacter pylori [1]
Enterovirus c [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Zhou ZH [117]
Stevens A [49]
Cheng Y [48]
Cottrell CA [47]
Ward AB [47]
Shin M [46]
Crofut EH [43]
Kashyap S [43]
Zhang K [43]
Bowman CA [39]
Burton DR [39]
Carnathan DG [39]
Christley S [39]
Copps J [39]
Gross J [39]
Labranche C [39]
Montefiori D [39]
Moore JP [39]
Morpurgo R [39]
Nogal B [39]
Oyen D [39]
Ozorowski G [39]
Patel R [39]
Rakasz EG [39]
Sanders RW [39]
Sather DN [39]
Sewall LM [39]
Silvestri G [39]
Sok D [39]
Torres JL [39]
Vigdorovich V [39]
Wilson IA [39]
Yuan M [39]
Van Breemen M [39]
Van Gils Mj [39]
Van Schooten J [39]
Van Der Woude P [39]
Conway JF [33]
Tan YZ [33]
Julius D [32]
Jih J [31]
Chiu W [30]
Cui Y [30]
Lyumkis D [30]
Huet A [28]
Mckenna R [28]
Passos DO [28]
Barad BA [26]
Grotjahn DA [26]
Johnson PJ [26]
Muratore KA [25]
Agbandje-mckenna M [24]
Aiyer S [24]
Baldwin PR [24]
Benner SA [24]
Bowman ME [24]
Dordevic-marquardt S [24]
Hoshika S [24]
Hull JA [24]
Louie G [24]
Mehrani A [24]
Mietzsch M [24]
Noel JAP [24]
Oh J [24]
Shan Z [24]
Tan SM [24]
Wang D [24]
Wang SE [24]
Freeman KG [22]
Frost A [22]
Ho CM [22]
Jacobs-sera D [22]
Noble AJ [22]
White SJ [22]
Hatfull GF [21]
Ho MC [21]
Lowary TL [21]
Macale LS [21]
Mondal S [21]
Narsico JT [21]
Ortiz V [21]
Park D [21]
Perez RJ [21]
Podgorski J [21]
Silva BH [21]
Mccullough J [20]
Nguyen HC [20]
Sundquist WI [20]
Talledge N [20]
Alvarez-cabrera AL [19]
Crofut E [19]
Li Y [19]
Liu Y-T [19]
Anton L [18]
Cheng W [18]
Cobb DW [18]
Haile M [18]
Han L [18]
Lee CL [18]
Li E [18]

Author by ORCID

Zhou ZH [76]
Cottrell CA [47]
Shin M [46]
Cheng Y [43]
Gross J [39]
Bowman CA [39]
Silvestri G [39]
Burton DR [39]
Ward AB [39]
Morpurgo R [39]
Nogal B [39]
Yuan M [39]
Sewall LM [39]
Sanders RW [39]
Van Schooten J [39]
Labranche C [39]
Sather DN [39]
Sok D [39]
Ozorowski G [39]
Torres JL [39]
Montefiori D [39]
Van Gils Mj [39]
Vigdorovich V [39]
Copps J [39]
Tan YZ [33]
Grotjahn DA [26]
Chiu W [26]
Zhang K [26]
Aiyer S [24]
Hoshika S [24]
Noel JAP [24]
Mckenna R [24]
Wang D [24]
Oh J [24]
Lyumkis D [24]
Passos DO [24]
Johnson PJ [24]
Shan Z [24]
Cui Y [21]
Frost A [21]
Noble AJ [20]
Mccullough J [19]
Talledge N [19]
Nguyen HC [19]
Zhang Y [17]
Sun J [17]
Laughlin TG [15]
Sundquist WI [15]
Pintilie G [15]
Wenzel D [15]
Iwasa J [15]
Martin-serrano J [15]
Alian A [15]
Ullman KS [15]
Frydman J [14]
Eng ET [13]
Zhao Y [13]
Lander GC [13]
Jih J [12]
Goetschius DJ [12]
Villa E [12]
Bepler T [11]
Das R [11]
Rangan R [11]
Kappel K [11]
Rice WJ [11]
Shan SO [11]
Conway JF [11]
Li S [11]
Lentzsch AM [11]
Su Z [11]
Zheludev IN [11]
Zhang K [11]
Biggin PC [10]
Jeruzalmi D [10]
Liu W [10]
Kindig K [10]
Hartmann SR [10]
Acharya P [10]
Berger B [10]
Gibbs E [10]
Seiferth D [10]
Chakrapani S [10]
Schmid MF [10]
Liu YT [10]
Ding K [9]
Carragher B [9]
Parrish CR [9]
Potter CS [9]
Hafenstein SL [9]
Elbaum M [8]
Sosa H [8]
Wrapp D [8]
Benoit MPMH [8]
Pallesen J [8]
Kwok BH [8]
Wang N [8]
Croxford M [8]
Wang H [8]
Agard D [8]

Journal

NAT COMMUN [117]
CELL [55]
BIORXIV [42]
PLOS PATHOG [42]
TO BE PUBLISHED [39]
ELIFE [37]
SCI ADV [28]
J VIROL [22]
PNAS [22]
NATURE [21]
NAT STRUCT MOL BIOL [17]
NAT METHODS [15]
STRUCTURE [15]
SCI REP [9]
CELL REP [8]
J MOL BIOL [8]
J CELL BIOL [7]
MBIO [7]
CURR BIOL [6]
IUCRJ [6]
NAT CHEM BIOL [6]
NAT NANOTECHNOL [6]
SCIENCE [6]
ACS NANO [5]
COMMUN BIOL [5]
PROTEIN CELL [4]
CELL DISCOV [3]
J BACTERIOL [3]
PNAS NEXUS [3]
J STRUCT BIOL [2]
MOL THER METHODS CLIN DEV [2]
PLOS BIOL [2]
VIRUSES [2]
FRONT MOL BIOSCI [1]
J.MUSCLE RES.CELL.MOTIL. [1]
NAT MED [1]
NAT MICROBIOL [1]
NAT PROTOC [1]
RES COMPUT MOL BIOL [1]

Software

Microscope

Electron Source

Film or detector model

External links