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grant_code:"1S10OD018111"

Filter By

Current Database

  • EMDB [96]

Current status

  • REL [96]

Sample type

  • Virus [55]
  • Protein [41]
  • Complex [36]
  • Ligand [13]
  • RNA [10]
  • Cellular component [4]
  • Cell [2]
  • DNA [1]
  • Other [1]

Organism

  • Trichomonas vaginalis [23]
  • Cypovirus 1 [17]
  • Human cytomegalovirus [14]
  • Homo sapiens [6]
  • Shewanella oneidensis [5]
  • Aquareovirus c [4]
  • Mammalian orthoreovirus [4]
  • Mammalian orthoreovirus [3]
  • Methanospirillum hungatei [3]
  • Rattus norvegicus [2]
  • Human herpesvirus 1 [2]
  • Indiana vesiculovirus [2]
  • Rotavirus a [2]
  • 3052303 [2]
  • Bluetongue virus [2]
  • Tetrahymena thermophila [2]
  • Trichomonas vaginalis virus 2 [2]
  • Human herpesvirus 1 [1]
  • Aquareovirus c [1]
  • Human mastadenovirus c [1]
  • Human herpesvirus 8 [1]
  • Leishmania donovani [1]
  • Zika virus [1]

EM Method

  • Single-particle [87]
  • Subtomogram averaging [5]
  • Helical reconstruction [3]
  • Tomography [1]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [53]
  • ≥ 4Å and < 5Å [23]
  • ≥ 6Å and < 8Å [6]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [2]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [9]
  • 250-500 kDa [3]
  • 500-1000 kDa [4]
  • 1-2 MDa [6]
  • 2-5 MDa [10]
  • 5-10 MDa [2]
  • > 10 MDa [3]

Release Date

  • 2025 [28]
  • 2024 [14]
  • 2023 [6]
  • 2022 [8]
  • 2021 [10]
  • 2020 [1]
  • 2019 [16]
  • 2018 [8]
  • 2017 [2]
  • 2016 [3]

Author by name

  • Zhou ZH [95]
  • Stevens A [29]
  • Cui Y [26]
  • Johnson PJ [25]
  • Muratore KA [24]
  • Crofut EH [23]
  • Kashyap S [23]
  • Wang SE [23]
  • Zhou K [18]
  • Sun J [17]
  • Zhang Y [17]
  • Liu W [14]
  • Liu YT [14]
  • Cui YX [13]
  • Zhang YN [12]
  • Jih J [11]
  • Zhou H [11]
  • Ding K [9]
  • Kang JS [7]
  • Sun JC [7]
  • Shivakoti S [6]
  • Zhang X [6]
  • Alvarez-cabrera AL [5]
  • Dai X [5]
  • Fan C [5]
  • Fan H [5]
  • Fan HC [5]
  • Huang Y [5]
  • Liu Y [5]
  • Lou Q [5]
  • Miller JF [5]
  • Pan M [5]
  • Wang L [5]
  • Dai XH [4]
  • Lai M [4]
  • Luo M [4]
  • Mrazek J [4]
  • Ng HL [4]
  • Roy P [4]
  • Stevens AW [4]
  • Strugatsky D [4]
  • Wang H [4]
  • Yang OO [4]
  • Gunsalus RP [3]
  • Jiang J [3]
  • Atanasov I [2]
  • Basu R [2]
  • Celma CC [2]
  • Chan H [2]
  • Chang T [2]
  • Chang W [2]
  • Erde J [2]
  • Feigon J [2]
  • Ge P [2]
  • He Y [2]
  • Henstra AM [2]
  • Kickhoefer VA [2]
  • Leon D [2]
  • Liao S [2]
  • Loo JA [2]
  • Lyles KVM [2]
  • Maslov DA [2]
  • Muratore K [2]
  • Ogorzalek Loo Rr [2]
  • Qing L [2]
  • Rome LH [2]
  • Sawaya MR [2]
  • Shen W [2]
  • Si Z [2]
  • Stevens AS [2]
  • Sun R [2]
  • Susac L [2]
  • Tang S [2]
  • Tsao J [2]
  • Wang Y [2]
  • Yu I [2]
  • Zhang J [2]
  • Abskharon R [1]
  • Baiesc FL [1]
  • Boxiao W [1]
  • Boyer DR [1]
  • Depaola Iv P [1]
  • Eisenberg DS [1]
  • Evans MJ [1]
  • Fang J [1]
  • Gao L [1]
  • Garcia-sastre A [1]
  • Gong D [1]
  • Gong DY [1]
  • Hai R [1]
  • Hillyer T [1]
  • Hiromasa Y [1]
  • Hong H [1]
  • Hui WH [1]
  • Jiang L [1]
  • Lim H [1]
  • Loo RR [1]
  • Lu J [1]
  • Nguyen HH [1]
  • Nguyen L [1]

Author by ORCID

  • Zhou ZH [77]
  • Johnson PJ [23]
  • Cui Y [21]
  • Zhang Y [17]
  • Sun J [17]
  • Jih J [11]
  • Liu W [10]
  • Liu YT [10]
  • Ding K [9]
  • Stevens A [6]
  • Kang JS [6]
  • Dai X [5]
  • Alvarez-cabrera AL [4]
  • Lai M [4]
  • Shivakoti S [4]
  • Fan C [4]
  • Pan M [4]
  • Wang H [4]
  • Zhou K [3]
  • Chang T [2]
  • Basu R [2]
  • Roy P [2]
  • Loo JA [2]
  • Ogorzalek Loo Rr [2]
  • He Y [2]
  • Gunsalus RP [2]
  • Henstra AM [2]
  • Leon D [2]
  • Si Z [2]
  • Wang Y [2]
  • Liao S [2]
  • Lyles KVM [2]
  • Sawaya MR [2]
  • Luo M [2]
  • Zhang J [2]
  • Gao L [1]
  • Nguyen L [1]
  • Shin WS [1]
  • Hai R [1]
  • Loo RR [1]
  • Ren W [1]
  • Rosenberg GM [1]
  • Jiang J [1]
  • Jiang L [1]
  • Veit EC [1]
  • Boyer DR [1]
  • Song J [1]
  • Sun C [1]
  • Lu J [1]
  • Abskharon R [1]
  • Eisenberg DS [1]
  • Depaola Iv P [1]
  • Hong H [1]

Journal

  • NAT COMMUN [39]
  • NAT STRUCT MOL BIOL [13]
  • SCI ADV [12]
  • ACS NANO [5]
  • J VIROL [4]
  • PNAS [4]
  • PROTEIN CELL [4]
  • CELL [2]
  • MBIO [2]
  • SCIENCE [2]
  • STRUCTURE [2]
  • TO BE PUBLISHED [2]
  • BIOCHEMISTRY [1]
  • J BIOL CHEM [1]
  • NAT MICROBIOL [1]
  • NATURE [1]
  • PNAS NEXUS [1]

Software

  • RELION [31]
  • CRYOSPARC [26]
  • CTFFIND [8]
  • IMIRS [3]
  • CRYOLO [1]
  • ELITE3D [1]

Microscope

  • FEI TITAN KRIOS [64]
  • FEI TITAN [22]
  • TFS KRIOS [10]

Electron Source

  • FIELD EMISSION GUN [96]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [44]
  • GATAN K3 6K X 4K [32]
  • GATAN K2 QUANTUM 4K X 4K [19]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • PDB [38]
  • UniProt [36]
  • PDBe-Kb [34]
  • InterPro [32]
  • Gene Ontology [31]
  • Pfam [29]
  • ChEBI [13]
  • DrugBank [13]
  • ChEMBL [10]
  • AlphaFold DB [8]
  • SCOP2 [3]
  • Complex Portal [2]
  • CATH [1]
  • EMPIAR [1]
Sort by: Download
Showing 1 - 10 of 96. Page 1 of 10
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EMD-70983
Download Map
3D View
CryoEM structure of hook-filament junction complex from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 6.1 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70984
Download Map
3D View
CryoEM structure of curved flagellar filament from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 3.2 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70985
Download Map
3D View
CryoEM structure of FlaA filament from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9oxj

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70986
Download Map
3D View
CryoEM structure of FlaB filament from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9oxk

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70987
Download Map
3D View
CryoEM structure of hook from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 4.18 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-46009
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3D View
Doublet Microtubules from T. Vaginalis - local refine 12
Release date: May 14, 2025
Resolution: 3.7 Å
EM Method: Single-particle

Stevens A, Kashyap S, Crofut EH, Wang SE, Muratore KA, Johnson PJ, Zhou ZH

Nat Commun (2025) 16 pp. 3996-3996 [ DOI: doi:10.1038/s41467-025-59369-y Pubmed: 40301421 ]

EMD-46020
Download Map
3D View
Doublet Microtubule from T. vaginalis - local refine 25
Release date: May 14, 2025
Resolution: 3.8 Å
EM Method: Single-particle

Stevens A, Kashyap S, Crofut EH, Wang SE, Muratore KA, Johnson PJ, Zhou ZH

Nat Commun (2025) 16 pp. 3996-3996 [ DOI: doi:10.1038/s41467-025-59369-y Pubmed: 40301421 ]

EMD-46021
Download Map
3D View
Doublet microtubules from T. vaginalis - local refine 26
Release date: May 14, 2025
Resolution: 3.7 Å
EM Method: Single-particle

Stevens A, Kashyap S, Crofut EH, Wang SE, Muratore KA, Johnson PJ, Zhou ZH

Nat Commun (2025) 16 pp. 3996-3996 [ DOI: doi:10.1038/s41467-025-59369-y Pubmed: 40301421 ]

EMD-46023
Download Map
3D View
Doublet Microtubule from T. vaginalis - local refine 27
Release date: May 14, 2025
Resolution: 3.8 Å
EM Method: Single-particle

Stevens A, Kashyap S, Crofut EH, Wang SE, Muratore KA, Johnson PJ, Zhou ZH

Nat Commun (2025) 16 pp. 3996-3996 [ DOI: doi:10.1038/s41467-025-59369-y Pubmed: 40301421 ]

EMD-46024
Download Map
3D View
Doublet microtubule from T. vaginalis - local refine 28
Release date: May 14, 2025
Resolution: 3.6 Å
EM Method: Single-particle

Stevens A, Kashyap S, Crofut EH, Wang SE, Muratore KA, Johnson PJ, Zhou ZH

Nat Commun (2025) 16 pp. 3996-3996 [ DOI: doi:10.1038/s41467-025-59369-y Pubmed: 40301421 ]

Sort by: Download
Showing 1 - 10 of 96. Page 1 of 10
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [96]

Current status

  • REL [96]

Sample type

  • Virus [55]
  • Protein [41]
  • Complex [36]
  • Ligand [13]
  • RNA [10]
  • Cellular component [4]
  • Cell [2]
  • DNA [1]
  • Other [1]

Organism

  • Trichomonas vaginalis [23]
  • Cypovirus 1 [17]
  • Human cytomegalovirus [14]
  • Homo sapiens [6]
  • Shewanella oneidensis [5]
  • Aquareovirus c [4]
  • Mammalian orthoreovirus [4]
  • Mammalian orthoreovirus [3]
  • Methanospirillum hungatei [3]
  • Rattus norvegicus [2]
  • Human herpesvirus 1 [2]
  • Indiana vesiculovirus [2]
  • Rotavirus a [2]
  • 3052303 [2]
  • Bluetongue virus [2]
  • Tetrahymena thermophila [2]
  • Trichomonas vaginalis virus 2 [2]
  • Human herpesvirus 1 [1]
  • Aquareovirus c [1]
  • Human mastadenovirus c [1]
  • Human herpesvirus 8 [1]
  • Leishmania donovani [1]
  • Zika virus [1]

EM Method

  • Single-particle [87]
  • Subtomogram averaging [5]
  • Helical reconstruction [3]
  • Tomography [1]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [53]
  • ≥ 4Å and < 5Å [23]
  • ≥ 6Å and < 8Å [6]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [2]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [9]
  • 250-500 kDa [3]
  • 500-1000 kDa [4]
  • 1-2 MDa [6]
  • 2-5 MDa [10]
  • 5-10 MDa [2]
  • > 10 MDa [3]

Release Date

  • 2025 [28]
  • 2024 [14]
  • 2023 [6]
  • 2022 [8]
  • 2021 [10]
  • 2020 [1]
  • 2019 [16]
  • 2018 [8]
  • 2017 [2]
  • 2016 [3]

Author by name

  • Zhou ZH [95]
  • Stevens A [29]
  • Cui Y [26]
  • Johnson PJ [25]
  • Muratore KA [24]
  • Crofut EH [23]
  • Kashyap S [23]
  • Wang SE [23]
  • Zhou K [18]
  • Sun J [17]
  • Zhang Y [17]
  • Liu W [14]
  • Liu YT [14]
  • Cui YX [13]
  • Zhang YN [12]
  • Jih J [11]
  • Zhou H [11]
  • Ding K [9]
  • Kang JS [7]
  • Sun JC [7]
  • Shivakoti S [6]
  • Zhang X [6]
  • Alvarez-cabrera AL [5]
  • Dai X [5]
  • Fan C [5]
  • Fan H [5]
  • Fan HC [5]
  • Huang Y [5]
  • Liu Y [5]
  • Lou Q [5]
  • Miller JF [5]
  • Pan M [5]
  • Wang L [5]
  • Dai XH [4]
  • Lai M [4]
  • Luo M [4]
  • Mrazek J [4]
  • Ng HL [4]
  • Roy P [4]
  • Stevens AW [4]
  • Strugatsky D [4]
  • Wang H [4]
  • Yang OO [4]
  • Gunsalus RP [3]
  • Jiang J [3]
  • Atanasov I [2]
  • Basu R [2]
  • Celma CC [2]
  • Chan H [2]
  • Chang T [2]
  • Chang W [2]
  • Erde J [2]
  • Feigon J [2]
  • Ge P [2]
  • He Y [2]
  • Henstra AM [2]
  • Kickhoefer VA [2]
  • Leon D [2]
  • Liao S [2]
  • Loo JA [2]
  • Lyles KVM [2]
  • Maslov DA [2]
  • Muratore K [2]
  • Ogorzalek Loo Rr [2]
  • Qing L [2]
  • Rome LH [2]
  • Sawaya MR [2]
  • Shen W [2]
  • Si Z [2]
  • Stevens AS [2]
  • Sun R [2]
  • Susac L [2]
  • Tang S [2]
  • Tsao J [2]
  • Wang Y [2]
  • Yu I [2]
  • Zhang J [2]
  • Abskharon R [1]
  • Baiesc FL [1]
  • Boxiao W [1]
  • Boyer DR [1]
  • Depaola Iv P [1]
  • Eisenberg DS [1]
  • Evans MJ [1]
  • Fang J [1]
  • Gao L [1]
  • Garcia-sastre A [1]
  • Gong D [1]
  • Gong DY [1]
  • Hai R [1]
  • Hillyer T [1]
  • Hiromasa Y [1]
  • Hong H [1]
  • Hui WH [1]
  • Jiang L [1]
  • Lim H [1]
  • Loo RR [1]
  • Lu J [1]
  • Nguyen HH [1]
  • Nguyen L [1]

Author by ORCID

  • Zhou ZH [77]
  • Johnson PJ [23]
  • Cui Y [21]
  • Zhang Y [17]
  • Sun J [17]
  • Jih J [11]
  • Liu W [10]
  • Liu YT [10]
  • Ding K [9]
  • Stevens A [6]
  • Kang JS [6]
  • Dai X [5]
  • Alvarez-cabrera AL [4]
  • Lai M [4]
  • Shivakoti S [4]
  • Fan C [4]
  • Pan M [4]
  • Wang H [4]
  • Zhou K [3]
  • Chang T [2]
  • Basu R [2]
  • Roy P [2]
  • Loo JA [2]
  • Ogorzalek Loo Rr [2]
  • He Y [2]
  • Gunsalus RP [2]
  • Henstra AM [2]
  • Leon D [2]
  • Si Z [2]
  • Wang Y [2]
  • Liao S [2]
  • Lyles KVM [2]
  • Sawaya MR [2]
  • Luo M [2]
  • Zhang J [2]
  • Gao L [1]
  • Nguyen L [1]
  • Shin WS [1]
  • Hai R [1]
  • Loo RR [1]
  • Ren W [1]
  • Rosenberg GM [1]
  • Jiang J [1]
  • Jiang L [1]
  • Veit EC [1]
  • Boyer DR [1]
  • Song J [1]
  • Sun C [1]
  • Lu J [1]
  • Abskharon R [1]
  • Eisenberg DS [1]
  • Depaola Iv P [1]
  • Hong H [1]

Journal

  • NAT COMMUN [39]
  • NAT STRUCT MOL BIOL [13]
  • SCI ADV [12]
  • ACS NANO [5]
  • J VIROL [4]
  • PNAS [4]
  • PROTEIN CELL [4]
  • CELL [2]
  • MBIO [2]
  • SCIENCE [2]
  • STRUCTURE [2]
  • TO BE PUBLISHED [2]
  • BIOCHEMISTRY [1]
  • J BIOL CHEM [1]
  • NAT MICROBIOL [1]
  • NATURE [1]
  • PNAS NEXUS [1]

Software

  • RELION [31]
  • CRYOSPARC [26]
  • CTFFIND [8]
  • IMIRS [3]
  • CRYOLO [1]
  • ELITE3D [1]

Microscope

  • FEI TITAN KRIOS [64]
  • FEI TITAN [22]
  • TFS KRIOS [10]

Electron Source

  • FIELD EMISSION GUN [96]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [44]
  • GATAN K3 6K X 4K [32]
  • GATAN K2 QUANTUM 4K X 4K [19]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • PDB [38]
  • UniProt [36]
  • PDBe-Kb [34]
  • InterPro [32]
  • Gene Ontology [31]
  • Pfam [29]
  • ChEBI [13]
  • DrugBank [13]
  • ChEMBL [10]
  • AlphaFold DB [8]
  • SCOP2 [3]
  • Complex Portal [2]
  • CATH [1]
  • EMPIAR [1]