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author:"Miller JF"

Filter By

Current Database

  • EMDB [29]

Current status

  • REL [29]

Sample type

  • Complex [20]
  • Protein [20]
  • Sample [8]
  • Virus [4]
  • Cellular component [1]

Organism

  • Clostridioides difficile [10]
  • Pseudomonas aeruginosa [6]
  • Bordetella phage bpp-1 [5]
  • Shewanella oneidensis [5]
  • Pseudomonas aeruginosa [2]

EM Method

  • Single-particle [25]
  • Helical reconstruction [3]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [14]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [3]
  • ≥ 30Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 500-1000 kDa [3]
  • 1-2 MDa [14]
  • > 10 MDa [1]

Release Date

  • 2025 [5]
  • 2024 [10]
  • 2020 [6]
  • 2015 [2]
  • 2013 [3]
  • 2011 [1]
  • 2010 [2]

Author by name

  • Miller JF [29]
  • Zhou ZH [29]
  • Scholl D [18]
  • Cai X [10]
  • Cai XY [10]
  • He Y [10]
  • Imani A [10]
  • Yu I [10]
  • Ge P [8]
  • Leiman PG [8]
  • Avaylon J [6]
  • Browning C [6]
  • Buth SA [6]
  • Chakraborty U [6]
  • Ding K [6]
  • Hodes A [6]
  • Hui WH [6]
  • Plattner M [6]
  • Prokhorov NS [6]
  • Shneider MM [6]
  • Fan H [5]
  • Fan HC [5]
  • Huang Y [5]
  • Liu Y [5]
  • Lou Q [5]
  • Jin L [4]
  • Zhang X [4]
  • Czornyj E [3]
  • Guo H [3]
  • Nieh AW [3]
  • Yu X [3]
  • Dai W [2]
  • Gingery M [2]
  • Qing L [2]

Author by ORCID

  • Zhou ZH [16]
  • Cai X [10]
  • He Y [10]
  • Leiman PG [8]
  • Plattner M [6]
  • Avaylon J [6]
  • Prokhorov NS [6]
  • Ding K [6]
  • Ge P [6]
  • Shneider MM [6]
  • Buth SA [6]
  • Lou Q [5]
  • Huang Y [5]

Journal

  • NAT COMMUN [10]
  • NATURE [6]
  • ACS NANO [5]
  • ELIFE [3]
  • NAT STRUCT MOL BIOL [2]
  • PNAS [2]
  • TO BE PUBLISHED [1]

Software

  • RELION [8]
  • CRYOSPARC [3]
  • ELITE3D, FREALIGN [3]
  • IMIRS [2]
  • RELION, IHRSR [2]
  • PROTOMO [1]

Microscope

  • FEI TITAN KRIOS [21]
  • TFS KRIOS [5]
  • FEI POLARA 300 [2]
  • FEI TECNAI F20 [1]

Electron Source

  • FIELD EMISSION GUN [29]

Film or detector model

  • GATAN K3 6K X 4K [15]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • KODAK SO-163 FILM [5]
  • GENERIC TVIPS [2]
  • GENERIC CCD [1]

External links

  • PDB [19]
  • UniProt [18]
  • AlphaFold DB [17]
  • PDBe-Kb [16]
  • Pfam [16]
  • InterPro [14]
  • Gene Ontology [1]
  • SCOP2 [1]
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Showing 1 - 10 of 29. Page 1 of 3
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EMD-70983
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3D View
CryoEM structure of hook-filament junction complex from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 6.1 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70984
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3D View
CryoEM structure of curved flagellar filament from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 3.2 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70985
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3D View
CryoEM structure of FlaA filament from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9oxj
Q-score: 0.584

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70986
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3D View
CryoEM structure of FlaB filament from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9oxk
Q-score: 0.607

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-70987
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3D View
CryoEM structure of hook from Shewanella oneidensis
Release date: July 16, 2025
Resolution: 4.18 Å
EM Method: Single-particle

Lou Q, Fan H, Liu Y, Miller JF, Huang Y, Zhou ZH

ACS Nano (2025) [ Pubmed: 40627653 DOI: doi:10.1021/acsnano.5c02744 ]

EMD-42953
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CryoEM Structure of Diffocin - precontracted - Collar
Release date: Aug. 28, 2024
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8v3t

Cai X, He Y, Yu I, Imani A, Scholl D, Miller JF, Zhou ZH

Nat Commun (2024) 15 pp. 7057-7057 [ DOI: doi:10.1038/s41467-024-51038-w Pubmed: 39152109 ]

EMD-42956
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CryoEM Structure of Diffocin - precontracted - Baseplate - focused refinement on triplex region
Release date: Aug. 28, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8v3w

Cai X, He Y, Yu I, Imani A, Scholl D, Miller JF, Zhou ZH

Nat Commun (2024) 15 pp. 7057-7057 [ DOI: doi:10.1038/s41467-024-51038-w Pubmed: 39152109 ]

EMD-42957
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CryoEM Structure of Diffocin - precontracted - Baseplate reconstructed in C6 symmetry
Release date: Aug. 28, 2024
Resolution: 2.6 Å
EM Method: Single-particle

Cai X, He Y, Yu I, Imani A, Scholl D, Miller JF, Zhou ZH

Nat Commun (2024) 15 pp. 7057-7057 [ DOI: doi:10.1038/s41467-024-51038-w Pubmed: 39152109 ]

EMD-42958
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3D View
CryoEM Structure of Diffocin - precontracted - Baseplate reconstructed in C3 symmetry
Release date: Aug. 28, 2024
Resolution: 2.7 Å
EM Method: Single-particle

Cai X, He Y, Yu I, Imani A, Scholl D, Miller JF, Zhou ZH

Nat Commun (2024) 15 pp. 7057-7057 [ DOI: doi:10.1038/s41467-024-51038-w Pubmed: 39152109 ]

EMD-42959
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3D View
CryoEM Structure of Diffocin - precontracted - Trunk
Release date: Aug. 28, 2024
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 8v3x

Cai X, He Y, Yu I, Imani A, Scholl D, Miller JF, Zhou ZH

Nat Commun (2024) 15 pp. 7057-7057 [ DOI: doi:10.1038/s41467-024-51038-w Pubmed: 39152109 ]

Sort by: Download
Showing 1 - 10 of 29. Page 1 of 3
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [29]

Current status

  • REL [29]

Sample type

  • Complex [20]
  • Protein [20]
  • Sample [8]
  • Virus [4]
  • Cellular component [1]

Organism

  • Clostridioides difficile [10]
  • Pseudomonas aeruginosa [6]
  • Bordetella phage bpp-1 [5]
  • Shewanella oneidensis [5]
  • Pseudomonas aeruginosa [2]

EM Method

  • Single-particle [25]
  • Helical reconstruction [3]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [14]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [3]
  • ≥ 30Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 500-1000 kDa [3]
  • 1-2 MDa [14]
  • > 10 MDa [1]

Release Date

  • 2025 [5]
  • 2024 [10]
  • 2020 [6]
  • 2015 [2]
  • 2013 [3]
  • 2011 [1]
  • 2010 [2]

Author by name

  • Miller JF [29]
  • Zhou ZH [29]
  • Scholl D [18]
  • Cai X [10]
  • Cai XY [10]
  • He Y [10]
  • Imani A [10]
  • Yu I [10]
  • Ge P [8]
  • Leiman PG [8]
  • Avaylon J [6]
  • Browning C [6]
  • Buth SA [6]
  • Chakraborty U [6]
  • Ding K [6]
  • Hodes A [6]
  • Hui WH [6]
  • Plattner M [6]
  • Prokhorov NS [6]
  • Shneider MM [6]
  • Fan H [5]
  • Fan HC [5]
  • Huang Y [5]
  • Liu Y [5]
  • Lou Q [5]
  • Jin L [4]
  • Zhang X [4]
  • Czornyj E [3]
  • Guo H [3]
  • Nieh AW [3]
  • Yu X [3]
  • Dai W [2]
  • Gingery M [2]
  • Qing L [2]

Author by ORCID

  • Zhou ZH [16]
  • Cai X [10]
  • He Y [10]
  • Leiman PG [8]
  • Plattner M [6]
  • Avaylon J [6]
  • Prokhorov NS [6]
  • Ding K [6]
  • Ge P [6]
  • Shneider MM [6]
  • Buth SA [6]
  • Lou Q [5]
  • Huang Y [5]

Journal

  • NAT COMMUN [10]
  • NATURE [6]
  • ACS NANO [5]
  • ELIFE [3]
  • NAT STRUCT MOL BIOL [2]
  • PNAS [2]
  • TO BE PUBLISHED [1]

Software

  • RELION [8]
  • CRYOSPARC [3]
  • ELITE3D, FREALIGN [3]
  • IMIRS [2]
  • RELION, IHRSR [2]
  • PROTOMO [1]

Microscope

  • FEI TITAN KRIOS [21]
  • TFS KRIOS [5]
  • FEI POLARA 300 [2]
  • FEI TECNAI F20 [1]

Electron Source

  • FIELD EMISSION GUN [29]

Film or detector model

  • GATAN K3 6K X 4K [15]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • KODAK SO-163 FILM [5]
  • GENERIC TVIPS [2]
  • GENERIC CCD [1]

External links

  • PDB [19]
  • UniProt [18]
  • AlphaFold DB [17]
  • PDBe-Kb [16]
  • Pfam [16]
  • InterPro [14]
  • Gene Ontology [1]
  • SCOP2 [1]