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author:"Ding W"

Filter By

Current Database

  • EMDB [56]

Current status

  • REL [56]

Sample type

  • Complex [53]
  • Protein [43]
  • Ligand [23]
  • RNA [5]
  • DNA [4]
  • Virus [3]
  • Cellular component [2]

Organism

  • Homo sapiens [33]
  • Human immunodeficiency virus 1 [13]
  • Synthetic construct [7]
  • Spinacia oleracea [6]
  • Western equine encephalitis virus [5]
  • Thermoflavifilum thermophilum [5]
  • Branchiostoma lanceolatum [5]
  • Discosoma sp. [5]
  • Mus musculus [4]
  • Rattus norvegicus [3]
  • Bos taurus [3]
  • Human coronavirus 229e [2]
  • Candidatus accumulibacter adiacens [2]
  • (no species) [2]
  • Adeno-associated dependoparvovirus a [2]
  • Adeno-associated dependoparvovirus b [2]
  • Adeno-associated dependoparvovirus a [2]
  • Macaca mulatta [2]
  • Avian orthoavulavirus 1 [1]
  • Roseiflexus castenholzii [1]
  • Enterovirus a [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [56]

Resolution

  • ≥ 2Å and < 3Å [13]
  • ≥ 3Å and < 4Å [27]
  • ≥ 4Å and < 5Å [6]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [3]
  • ≥ 12Å and < 16Å [5]

Model molecular weight

  • 0-50 kDa [1]
  • 50-100 kDa [3]
  • 100-250 kDa [24]
  • 250-500 kDa [8]
  • 500-1000 kDa [1]
  • 2-5 MDa [5]
  • 5-10 MDa [1]

Release Date

  • 2025 [16]
  • 2024 [14]
  • 2023 [15]
  • 2020 [3]
  • 2019 [7]
  • 2018 [1]

Author by name

  • Ding W [56]
  • Yu X [14]
  • Hahn BH [13]
  • Liu W [13]
  • Shaw GM [13]
  • Li H [12]
  • Bjorkman PJ [11]
  • Delaitsch AT [11]
  • Gristick HB [11]
  • Keeffe JR [11]
  • Lee JA [11]
  • Skelly AN [11]
  • Zhang J [11]
  • Sun JP [9]
  • Zhang C [9]
  • Cui S [8]
  • Gao X [8]
  • Liu ZJ [8]
  • Qin B [8]
  • Shang K [8]
  • Wang L [8]
  • Zhu K [8]
  • Yang Z [7]
  • Zhu H [7]
  • Cao L [6]
  • Cui M [6]
  • Gao J [6]
  • Hu M [6]
  • Li S [6]
  • Lou Z [6]
  • Rao Z [6]
  • Ruan M [6]
  • Ruan MX [6]
  • Sun D [6]
  • Sun Y [6]
  • Sun Z [6]
  • Wang Y [6]
  • Wang Z [6]
  • Weng Y [6]
  • Zhang R [6]
  • Zhang Y [6]
  • Zhao R [6]
  • Cao D [5]
  • Cao Z [5]
  • Fu X [5]
  • Gan ZJ [5]
  • He ZL [5]
  • Hua T [5]
  • Li Y [5]
  • Liebscher I [5]
  • Liu J [5]
  • Liu S [5]
  • Liu X [5]
  • Ma B [5]
  • Meng B [5]
  • Mu Z [5]
  • Ping YQ [5]
  • Qi L [5]
  • Ricken A [5]
  • Schoneberg T [5]
  • Shi Z [5]
  • Shi ZJ [5]
  • Song ZC [5]
  • Ullmann C [5]
  • Wang MW [5]
  • Wang MX [5]
  • Wu L [5]
  • Wu LJ [5]
  • Xi YT [5]
  • Xiang Y [5]
  • Xiao P [5]
  • Xu W [5]
  • Xu WX [5]
  • Yi F [5]
  • Yue X [5]
  • Yue XL [5]
  • Zhang QY [5]
  • Zhang X [5]
  • Zhao L [5]
  • Zhao RJ [5]
  • Zhou SH [5]
  • Zhu KK [5]
  • Cheng J [4]
  • Ding JH [4]
  • Dou XD [4]
  • Gao JR [4]
  • Gao MX [4]
  • Hao Y [4]
  • He Y [4]
  • Huo TY [4]
  • Ji ZW [4]
  • Jiao N [4]
  • Liu YM [4]
  • Qin L [4]
  • Sha XY [4]
  • Wang JL [4]
  • Wang SH [4]
  • Xu G [4]
  • Xu GF [4]
  • Yuan Z [4]

Author by ORCID

  • Ding W [22]
  • Cui S [8]
  • Liu ZJ [6]
  • Zhang J [6]
  • Cui M [6]
  • Gao X [6]
  • Gao J [6]
  • Weng Y [6]
  • Zhang Y [6]
  • Lou Z [6]
  • Ruan M [6]
  • Meng B [5]
  • Wu L [5]
  • Hua T [5]
  • Shi Z [5]
  • Cheng J [4]
  • Dou XD [4]
  • Li Y [4]
  • Jiao N [4]
  • Yu X [4]
  • Sun JP [4]
  • Hao Y [4]
  • Chen Y [3]
  • Song X [3]
  • Fu ZF [2]
  • Liu ZJ [2]
  • Peng G [2]
  • Ding W [2]
  • Huang X [2]
  • Stuart W [2]
  • Zhu Y [2]
  • Xiao S [2]
  • Hu M [2]
  • Sun L [2]
  • Morris DJ [1]
  • Lindemuth E [1]
  • Wang S [1]
  • Mason RD [1]
  • Harrison SC [1]
  • Li H [1]
  • Saunders KO [1]
  • Roederer M [1]
  • Louder MK [1]
  • Wagh K [1]
  • Lewis MG [1]
  • Xu XL [1]
  • Wiehe K [1]
  • Xin YY [1]
  • Sun F [1]
  • Wang J [1]
  • Kepler TB [1]
  • Rando J [1]
  • Korber BT [1]
  • Shaw GM [1]
  • Rosario C [1]
  • Chohan N [1]
  • Hraber PT [1]
  • Williams WB [1]
  • Gorman J [1]
  • Moody MA [1]
  • Hwang KK [1]
  • Mascola JR [1]
  • Doria-rose NA [1]
  • Haynes BF [1]
  • Kelsoe G [1]
  • Connell J [1]
  • Hahn BH [1]
  • Bar KJ [1]
  • Chug H [1]
  • Roark RS [1]
  • Blankenship RE [1]
  • Russell RM [1]
  • Ding Y [1]
  • Shi Y [1]
  • Lee FH [1]
  • Nguyen R [1]
  • Bonsignori M [1]
  • Kwong PD [1]
  • Murphy AI [1]
  • Raymond DD [1]

Journal

  • NATURE [15]
  • NPJ VACCINES [11]
  • NAT COMMUN [8]
  • CELL REP [6]
  • NAT PLANTS [6]
  • CELL [5]
  • NAT METAB [4]
  • CELL DISCOV [2]
  • NAT MICROBIOL [2]
  • ELIFE [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [25]
  • RELION [2]
  • CTFFIND [1]

Microscope

  • FEI TITAN KRIOS [37]
  • TFS KRIOS [8]
  • FEI TECNAI ARCTICA [6]
  • FEI TALOS ARCTICA [5]

Electron Source

  • FIELD EMISSION GUN [56]

Film or detector model

  • GATAN K3 6K X 4K [35]
  • GATAN K2 SUMMIT 4K X 4K [11]
  • FEI FALCON II 4K X 4K [6]
  • FEI FALCON IV 4K X 4K [3]
  • FEI FALCON III 4K X 4K [1]

External links

  • PDB [43]
  • PDBe-Kb [43]
  • Pfam [43]
  • UniProt [43]
  • AlphaFold DB [35]
  • InterPro [34]
  • Gene Ontology [28]
  • ChEBI [20]
  • DrugBank [14]
  • ChEMBL [12]
  • CATH [1]
  • Complex Portal [1]
Sort by: Download
Showing 1 - 10 of 56. Page 1 of 6
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EMD-64484
Download Map
3D View
The full-length human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Release date: July 16, 2025
Resolution: 3.41 Å
EM Method: Single-particle
Fitted PDBs: 9ut8
Q-score: 0.377

Shi Z, Xu W, Wu L, Yue X, Liu S, Ding W, Zhang J, Meng B, Zhao L, Liu X, Liu J, Liu ZJ, Hua T

Nature (2025) [ Pubmed: 40555359 DOI: doi:10.1038/s41586-025-09302-6 ]

EMD-64485
Download Map
3D View
The VFT domains of human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Release date: July 16, 2025
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 9ut9
Q-score: 0.497

Shi Z, Xu W, Wu L, Yue X, Liu S, Ding W, Zhang J, Meng B, Zhao L, Liu X, Liu J, Liu ZJ, Hua T

Nature (2025) [ Pubmed: 40555359 DOI: doi:10.1038/s41586-025-09302-6 ]

EMD-64486
Download Map
3D View
The transmembrane domains of human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Release date: July 16, 2025
Resolution: 3.77 Å
EM Method: Single-particle
Fitted PDBs: 9uta
Q-score: 0.35

Shi Z, Xu W, Wu L, Yue X, Liu S, Ding W, Zhang J, Meng B, Zhao L, Liu X, Liu J, Liu ZJ, Hua T

Nature (2025) [ Pubmed: 40555359 DOI: doi:10.1038/s41586-025-09302-6 ]

EMD-64487
Download Map
3D View
The full-length human sweet taste receptor TAS1R2 and TAS1R3 in the sucralose-bound state
Release date: July 16, 2025
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 9utb
Q-score: 0.318

Shi Z, Xu W, Wu L, Yue X, Liu S, Ding W, Zhang J, Meng B, Zhao L, Liu X, Liu J, Liu ZJ, Hua T

Nature (2025) [ Pubmed: 40555359 DOI: doi:10.1038/s41586-025-09302-6 ]

EMD-64488
Download Map
3D View
The VFT domains of human sweet taste receptor TAS1R2 and TAS1R3 in the sucralose-bound state
Release date: July 16, 2025
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 9utc
Q-score: 0.394

Shi Z, Xu W, Wu L, Yue X, Liu S, Ding W, Zhang J, Meng B, Zhao L, Liu X, Liu J, Liu ZJ, Hua T

Nature (2025) [ Pubmed: 40555359 DOI: doi:10.1038/s41586-025-09302-6 ]

EMD-47000
Download Map
3D View
Rhesus RHA10.01 Fab in complex with HIV-1 Env BG505 DS-SOSIP trimer
Release date: June 18, 2025
Resolution: 4.27 Å
EM Method: Single-particle
Fitted PDBs: 9dmb
Q-score: 0.315

Morris DJ, Gorman J, Zhou T, Lora J, Connell AJ, Li H, Liu W, Roark RS, Campion MS, Carey JW, Habib R, Li Y, Martella CL, Park Y, Singh A, Sowers KJ, Teng IT, Wang S, Chohan N, Ding W, Lauer C, Lewis E, Mason RD, Rando JM, Peyton L, Schramm CA, Wagh K, Korber B, Seaman MS, Douek DC, Haynes BF, Kulp DW, Roederer M, Hahn BH, Kwong PD, Shaw GM

Cell Rep (2025) 44 pp. 115848-115848 [ Pubmed: 40516049 DOI: doi:10.1016/j.celrep.2025.115848 ]

EMD-62749
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3D View
Structure of Western equine encephalitis virus 71V1658 strain VLP in complex with human PCDH10 EC1
Release date: June 4, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9l1n
Q-score: 0.435

Ma B, Cao Z, Ding W, Zhang X, Xiang Y, Cao D

Cell Rep (2025) 44 pp. 115724-115724 [ DOI: doi:10.1016/j.celrep.2025.115724 Pubmed: 40402741 ]

EMD-62898
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3D View
Structure of Western equine encephalitis virus McMillan strain in complex with VLDLR LA1-2
Release date: June 4, 2025
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9l99
Q-score: 0.504

Ma B, Cao Z, Ding W, Zhang X, Xiang Y, Cao D

Cell Rep (2025) 44 pp. 115724-115724 [ DOI: doi:10.1016/j.celrep.2025.115724 Pubmed: 40402741 ]

EMD-62899
Download Map
3D View
Structure of Western equine encephalitis virus McMillan strain in complex with VLDLR LA2-3
Release date: June 4, 2025
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9l9a
Q-score: 0.464

Ma B, Cao Z, Ding W, Zhang X, Xiang Y, Cao D

Cell Rep (2025) 44 pp. 115724-115724 [ DOI: doi:10.1016/j.celrep.2025.115724 Pubmed: 40402741 ]

EMD-63653
Download Map
3D View
Western equine encephalitis virus 71V1658 strain VLP in complex with human PCDH10 EC1-6
Release date: June 4, 2025
Resolution: 4.9 Å
EM Method: Single-particle

Ma B, Cao Z, Ding W, Zhang X, Xiang Y, Cao D

Cell Rep (2025) 44 pp. 115724-115724 [ DOI: doi:10.1016/j.celrep.2025.115724 Pubmed: 40402741 ]

Sort by: Download
Showing 1 - 10 of 56. Page 1 of 6
Display:
Statistics
×

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Preview first 10
Download

Filter By

Current Database

  • EMDB [56]

Current status

  • REL [56]

Sample type

  • Complex [53]
  • Protein [43]
  • Ligand [23]
  • RNA [5]
  • DNA [4]
  • Virus [3]
  • Cellular component [2]

Organism

  • Homo sapiens [33]
  • Human immunodeficiency virus 1 [13]
  • Synthetic construct [7]
  • Spinacia oleracea [6]
  • Western equine encephalitis virus [5]
  • Thermoflavifilum thermophilum [5]
  • Branchiostoma lanceolatum [5]
  • Discosoma sp. [5]
  • Mus musculus [4]
  • Rattus norvegicus [3]
  • Bos taurus [3]
  • Human coronavirus 229e [2]
  • Candidatus accumulibacter adiacens [2]
  • (no species) [2]
  • Adeno-associated dependoparvovirus a [2]
  • Adeno-associated dependoparvovirus b [2]
  • Adeno-associated dependoparvovirus a [2]
  • Macaca mulatta [2]
  • Avian orthoavulavirus 1 [1]
  • Roseiflexus castenholzii [1]
  • Enterovirus a [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [56]

Resolution

  • ≥ 2Å and < 3Å [13]
  • ≥ 3Å and < 4Å [27]
  • ≥ 4Å and < 5Å [6]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [3]
  • ≥ 12Å and < 16Å [5]

Model molecular weight

  • 0-50 kDa [1]
  • 50-100 kDa [3]
  • 100-250 kDa [24]
  • 250-500 kDa [8]
  • 500-1000 kDa [1]
  • 2-5 MDa [5]
  • 5-10 MDa [1]

Release Date

  • 2025 [16]
  • 2024 [14]
  • 2023 [15]
  • 2020 [3]
  • 2019 [7]
  • 2018 [1]

Author by name

  • Ding W [56]
  • Yu X [14]
  • Hahn BH [13]
  • Liu W [13]
  • Shaw GM [13]
  • Li H [12]
  • Bjorkman PJ [11]
  • Delaitsch AT [11]
  • Gristick HB [11]
  • Keeffe JR [11]
  • Lee JA [11]
  • Skelly AN [11]
  • Zhang J [11]
  • Sun JP [9]
  • Zhang C [9]
  • Cui S [8]
  • Gao X [8]
  • Liu ZJ [8]
  • Qin B [8]
  • Shang K [8]
  • Wang L [8]
  • Zhu K [8]
  • Yang Z [7]
  • Zhu H [7]
  • Cao L [6]
  • Cui M [6]
  • Gao J [6]
  • Hu M [6]
  • Li S [6]
  • Lou Z [6]
  • Rao Z [6]
  • Ruan M [6]
  • Ruan MX [6]
  • Sun D [6]
  • Sun Y [6]
  • Sun Z [6]
  • Wang Y [6]
  • Wang Z [6]
  • Weng Y [6]
  • Zhang R [6]
  • Zhang Y [6]
  • Zhao R [6]
  • Cao D [5]
  • Cao Z [5]
  • Fu X [5]
  • Gan ZJ [5]
  • He ZL [5]
  • Hua T [5]
  • Li Y [5]
  • Liebscher I [5]
  • Liu J [5]
  • Liu S [5]
  • Liu X [5]
  • Ma B [5]
  • Meng B [5]
  • Mu Z [5]
  • Ping YQ [5]
  • Qi L [5]
  • Ricken A [5]
  • Schoneberg T [5]
  • Shi Z [5]
  • Shi ZJ [5]
  • Song ZC [5]
  • Ullmann C [5]
  • Wang MW [5]
  • Wang MX [5]
  • Wu L [5]
  • Wu LJ [5]
  • Xi YT [5]
  • Xiang Y [5]
  • Xiao P [5]
  • Xu W [5]
  • Xu WX [5]
  • Yi F [5]
  • Yue X [5]
  • Yue XL [5]
  • Zhang QY [5]
  • Zhang X [5]
  • Zhao L [5]
  • Zhao RJ [5]
  • Zhou SH [5]
  • Zhu KK [5]
  • Cheng J [4]
  • Ding JH [4]
  • Dou XD [4]
  • Gao JR [4]
  • Gao MX [4]
  • Hao Y [4]
  • He Y [4]
  • Huo TY [4]
  • Ji ZW [4]
  • Jiao N [4]
  • Liu YM [4]
  • Qin L [4]
  • Sha XY [4]
  • Wang JL [4]
  • Wang SH [4]
  • Xu G [4]
  • Xu GF [4]
  • Yuan Z [4]

Author by ORCID

  • Ding W [22]
  • Cui S [8]
  • Liu ZJ [6]
  • Zhang J [6]
  • Cui M [6]
  • Gao X [6]
  • Gao J [6]
  • Weng Y [6]
  • Zhang Y [6]
  • Lou Z [6]
  • Ruan M [6]
  • Meng B [5]
  • Wu L [5]
  • Hua T [5]
  • Shi Z [5]
  • Cheng J [4]
  • Dou XD [4]
  • Li Y [4]
  • Jiao N [4]
  • Yu X [4]
  • Sun JP [4]
  • Hao Y [4]
  • Chen Y [3]
  • Song X [3]
  • Fu ZF [2]
  • Liu ZJ [2]
  • Peng G [2]
  • Ding W [2]
  • Huang X [2]
  • Stuart W [2]
  • Zhu Y [2]
  • Xiao S [2]
  • Hu M [2]
  • Sun L [2]
  • Morris DJ [1]
  • Lindemuth E [1]
  • Wang S [1]
  • Mason RD [1]
  • Harrison SC [1]
  • Li H [1]
  • Saunders KO [1]
  • Roederer M [1]
  • Louder MK [1]
  • Wagh K [1]
  • Lewis MG [1]
  • Xu XL [1]
  • Wiehe K [1]
  • Xin YY [1]
  • Sun F [1]
  • Wang J [1]
  • Kepler TB [1]
  • Rando J [1]
  • Korber BT [1]
  • Shaw GM [1]
  • Rosario C [1]
  • Chohan N [1]
  • Hraber PT [1]
  • Williams WB [1]
  • Gorman J [1]
  • Moody MA [1]
  • Hwang KK [1]
  • Mascola JR [1]
  • Doria-rose NA [1]
  • Haynes BF [1]
  • Kelsoe G [1]
  • Connell J [1]
  • Hahn BH [1]
  • Bar KJ [1]
  • Chug H [1]
  • Roark RS [1]
  • Blankenship RE [1]
  • Russell RM [1]
  • Ding Y [1]
  • Shi Y [1]
  • Lee FH [1]
  • Nguyen R [1]
  • Bonsignori M [1]
  • Kwong PD [1]
  • Murphy AI [1]
  • Raymond DD [1]

Journal

  • NATURE [15]
  • NPJ VACCINES [11]
  • NAT COMMUN [8]
  • CELL REP [6]
  • NAT PLANTS [6]
  • CELL [5]
  • NAT METAB [4]
  • CELL DISCOV [2]
  • NAT MICROBIOL [2]
  • ELIFE [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [25]
  • RELION [2]
  • CTFFIND [1]

Microscope

  • FEI TITAN KRIOS [37]
  • TFS KRIOS [8]
  • FEI TECNAI ARCTICA [6]
  • FEI TALOS ARCTICA [5]

Electron Source

  • FIELD EMISSION GUN [56]

Film or detector model

  • GATAN K3 6K X 4K [35]
  • GATAN K2 SUMMIT 4K X 4K [11]
  • FEI FALCON II 4K X 4K [6]
  • FEI FALCON IV 4K X 4K [3]
  • FEI FALCON III 4K X 4K [1]

External links

  • PDB [43]
  • PDBe-Kb [43]
  • Pfam [43]
  • UniProt [43]
  • AlphaFold DB [35]
  • InterPro [34]
  • Gene Ontology [28]
  • ChEBI [20]
  • DrugBank [14]
  • ChEMBL [12]
  • CATH [1]
  • Complex Portal [1]